rs223806806 SNP Detail

Summary

• ID
  rs223806806
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:73823491 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTGGGTGGG TATAGGGATT
  TTAAAGAGGT GAGTGAATGG AGAGTCTCCC CAGTCTAGTC AACGCACATG CACAAGCACG
  CACCATCCCC ACAAACAGTG CCTATGTGCA TCGATGTGCG TGTATATGCA TGTATGAGCA
  TGCTCACTGA GGACTGAAAT TAACCTTGCA TGCTTTCCTC CATCACACTC TATTATATTT
  R
  TTAAAGAAGG GCCTTTTGCC GAAACCAGGA CCCACCAGCC AATTAAGATT AGTCAGTCTA
  GCCATTTTGC CCTGGAGATA TCCTGTTTTT GTTTCCTGAG TTCTGGGATT ACAGAGAACT
  CTCATCTACC TGGCTTTTAT GTAGGCTTGG AGGACCAGAA CACTGGCTCA CACTTGATGG
  CGAGTGCTTT TTCCAAGGAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320346312	CHEV_2_73831204	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223806806					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:73823491 () rs orientation: forward

Symbol	Name	Function Class
Rr559269	regulatory region 559269	989 bp distal