rs223692137 SNP Detail

Summary

• ID
  rs223692137
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:33103972 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGAAATAC AGAGGCCGTA
  ATAAGCTCAG CCATTCATAA GTGAGTCAAG GCCTCAGCAG GAACAGAGAG CAACCCCCAA
  GACTTGCTTC ACTCTTTCTC AGAGAAGCTC AAGGAGTAAG GACCAGCCAC CCACAGCAGT
  CTCCAGTCAT TAAAACAAAA CATTCCTTAG CTATTTATTG GTTTTCCTCC CTACCTTCCA
  Y
  TCCTGGTTTC CCAGATACGT TCCCCCCCCA CCACCACCAC CACCACCAAA TCACTCCCTG
  GATTCAAGTT AATCTCCAGA TTTGTTTTTA ATGCAATTCA AGCCTAACCC AGTCTCTTCT
  CCTTCGCTTC TCCACATCTC TCACTCATTT GATGGGTCTG TTGAGTCATA CAGAATATTA
  GACACTACCA GCCCCACCTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321780607	CHEV_6_33077037	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223692137					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:33103972 () rs orientation: forward

Symbol	Name	Function Class
Rr628172	regulatory region 628172	102 bp distal
Rr628173	regulatory region 628173	353 bp proximal