rs223553123 SNP Detail

Summary

• ID
  rs223553123
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:42030145 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATCTTCTAGA CCTGGAGGTG GTTTTGAACC ACCTGATGTT
  GGTGCTGGGA ACCAAACCTC ACTAGGTCCT CTGAAAGAGC AGTAAACACC TTTAGTTGCT
  A
  AGAGTCACCT CTGAAGCCCC CAATGGTTAC TCTTAAGAAT TTGTTGAACT AACTCTAATC
  TGAAGGTTTA TGGGAGAAGA CCTTTGCATA TGCCTCCAT                       
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320730625	CHEV_3_41879632	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223553123					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:42030145 () rs orientation: forward

Symbol	Name	Function Class
Rr576014	regulatory region 576014	779 bp distal
Rr576015	regulatory region 576015	1047 bp distal