rs223343757 SNP Detail

Summary

• ID
  rs223343757
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:21532066 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTTCTAAGC AATGAGGGTA GGCTTTTTGG
  AAGCATTGGT CTGTTTGTTT CCAGGTTTGG TTTGTATTTG TTCTTTTTAA AGCCAAGGAG
  CTTTCTAAAT TTCTTCAAAG GATAGTTTTG CATTGGGCAT TTTATTAGGG GCTTTTTCTC
  W
  CAGAAAGAAC CCTCAGTAGA AACCACCCTG GGAGAAAAAG CTACAAAGGC AGGATTATGG
  AAGCCCAAGA AATAAATAAA TAAAACCAAG AAAACAGAAG TGGAGCCACA GCTAAAACAG
  GTGTTTTACA TTTCAGACTG GAGGCAAATC                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320682945	CHEV_3_21376824	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223343757					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:21532066 () rs orientation: forward

Symbol	Name	Function Class
Gm31610	predicted gene, 31610	within coordinates
Rr574124	regulatory region 574124	231 bp distal
Rr574125	regulatory region 574125	953 bp proximal