rs223317936 SNP Detail

Summary

• ID
  rs223317936
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:51113323 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGGTTTCAC TGAGTTGCCT
  AGGCTAGCCC TGATCTCTCT TTGTAGCCCA TACAGGCAAT GAATTTATAA TTCTCCTGCC
  TCTGCCTCCT GAGTAACTGG AATTACATAC CTATGCTAGG CCTAGTTCTG CTTTTTAAAA
  GATTTGTTTC AACTTTCATA TTCGCCTAAG TCAATGACTA CTAGTTGGCA AAAAAAAAAA
  M
  CCAATCAGTG GTTCAAAAGT TAATATGCAT AGCATGGTGT CACATGCCTT TAATTCCAGC
  ACTTGGGAGG CAGAGGTAAG TGAATCTCTG TGAGTTCAAG GCCAGCCTGG TCTACAGAGC
  CAGTTCCAGG ACAGCCAGGG CTAATACACA GAGAACCCTT GTCTAGAAAA ACCAAAAACA
  AACAAAAAGT CAATATGGAA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320761972	CHEV_3_51009824	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223317936					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:51113323 () rs orientation: forward

Symbol	Name	Function Class
Rr576238	regulatory region 576238	1705 bp distal
Rr576239	regulatory region 576239	1236 bp distal
Rr576240	regulatory region 576240	683 bp proximal