rs223241223 SNP Detail

Summary

• ID
  rs223241223
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:8930626 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GAAGTCTGG TTCTCTTATG CCCTCCAGGA
  CTCTCACCTC TGAGAACTTC ACCATGCCCT AGTGAAAGCA TGAAATAGAA CAAAGACAAT
  ACGCCATCCA CTCTCAAAGA GCAGCCCACC ACCTCACGGC CCACCACCTC CTAGGGGTTT
  R
  ATAAATACTA AGACTGATGA GCTGTGCAGA TGAGCGAAAC CTGACTGCAG TGAATTTAAG
  TAATAAGAGT AGATTTTCAC ACTAAAGTAA AACATAGTTG AATATTTTCT TTTCTTTTCC
  ATCGTGAAAC TGGTTCTTTC CCATAGGACG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320648905	CHEV_3_8865566	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223241223					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:8930626 () rs orientation: forward

Symbol	Name	Function Class
Mrps28	mitochondrial ribosomal protein S28	Intron
Rr406711	regulatory region 406711	within coordinates
Rr407269	regulatory region 407269	531 bp proximal
Rr573330	regulatory region 573330	1760 bp distal
Rr573331	regulatory region 573331	636 bp distal
Rr573332	regulatory region 573332	within coordinates