rs223096394 SNP Detail

Summary

• ID
  rs223096394
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101075913 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTATACTTA AAGGAGACTC CCCTTGGGCG
  TATAGCTGGG CTGGAGTACG GTGTGCAGAG ACAGGGTGGG AAGCATGTGG CATAAGTGCT
  AAAGCAGTGA CAGAGGGAAG GGGAGGGTTG TTTCTATAGG ACATCATGAC TATTAGCAGA
  R
  CCTGGGGGAC CTCCCTGCAA GGGCAGGTTG GGGAGCATGC TACAGGGATT TCATGCAGAT
  TCCAGGTAGA GGTTTCTAGG GAGGAGTTGG ATACTTGGGT TGGAGAGTAA GGGAGGTCTT
  GAGTGACAGC AGCTCAGAGT CAGTCCCTGC                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320851220	CHEV_3_100972520	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs223096394					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101075913 () rs orientation: forward

Symbol	Name	Function Class
Rr375458	regulatory region 375458	within coordinates
Rr581973	regulatory region 581973	1509 bp proximal