rs222855972 SNP Detail

Summary

• ID
  rs222855972
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148045945 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ccacctatt aagtcatggg ttacaagttt
  gcaccaccat gcctggcttg tgtagagttg gggactgaac tcagtgcagt catgcacact
  aagcaagcgc tctattaact gtgccatagc ccatgcccAA GACATTGTAC TTAAAAAata
  W
  atatatatat atatatatat atatatCACa catgactaca ccatagctct tttcagacac
  accagaaaag gacattagat cccattacag atggttgtga gccaccatat ggttgctggg
  aattgaactc aggacctctg gaagagcagt                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321416042	CHEV_4_147335597	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222855972					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148045945 () rs orientation: forward

Symbol	Name	Function Class
Gm69767	predicted gene, 69767	258 bp downstream
Rr407044	regulatory region 407044	796 bp proximal
Rr604535	regulatory region 604535	822 bp distal
Rr604536	regulatory region 604536	1120 bp distal
Rr604537	regulatory region 604537	1331 bp proximal
Rr604538	regulatory region 604538	1936 bp proximal