rs222794713 SNP Detail

Summary

• ID
  rs222794713
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:52705353 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AAGTAAAGT TAACTGGAAA GAAACCTGTA
  ATGTGTTCTC TTGCCCCTTC TCCAGCACCA GCCCCTTTCT TTTCTTGTTA TGCCCCACCC
  CCTTTACGTT TTAAAACTCT CCCTCTCATT TCTCAAATGG GCAAGTGATT CCTGCCCTCA
  S
  AGGAGTGCCA GCAAGGTGGT AATCAGTCAA AGAAACTGGA AAGGAACTAG Cgtgtgtgtg
  tgtgtgtgtg tgtgtgtgtg tgtgtgtgtt tgtTCCTAGT CTGGTGCTGA CTCATTGTGT
  GATCTCGTCC CCAAGAGCTT CAAGTTCTCT                                 
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320765232	CHEV_3_52601854	CHEVERUD	SCREENING_POP	f	SNP	G	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222794713					SNP	G	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:52705353 () rs orientation: forward

Symbol	Name	Function Class
Gm30292	predicted gene, 30292	148 bp upstream
Rr576585	regulatory region 576585	within coordinates