rs222791507 SNP Detail

Summary

• ID
  rs222791507
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:183967133 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCGGCCTCT TTGAAATCAG
  CTGGGAAATC AGTCTCTGAA TATTGATGAG AATAGACAAT AACAGCTGGG CCAGAAGCAC
  ACCGTCGGTT CTCCAGGGTT TCCAGTTTGC CTCCTGTGTA CATTAGGATT TAGCCTCTGT
  AAGTACAACA CACACACACA CACACACACA CACACACACA CACACACACA CATTTATGGA
  R
  AGAAAGAGAC ACAAATAAAT AACCTATCTC TTTACCGTGT GTGTATTTTC ATATTATTCC
  TGGAACATAC ACTCAATGTA TCTTGAACAT GTCAATACTA ATTTATCTGT ATATAGCATA
  TATATCTTGA ATGTATGCCA ATATCATATA AGTCTATCAG TCTATCTTCC ATCCCTCTGT
  CCATTTCCTC TTGTTTTCCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320166636	CHEV_1_186058815	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222791507					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:183967133 () rs orientation: forward

Symbol	Name	Function Class
Rr425189	regulatory region 425189	329 bp proximal
Rr425190	regulatory region 425190	852 bp proximal