GGTCCAGTGT GAGGTTTTGA GTTCTCACAA AGACTATTCC TTGTTCCCCT GCCTTGCTCT ACCTGGGTAG TGTGGGGCTC ATGGGAAGAC CCAAACCTAT TTCTCTCAGG GCCTCAATTA CTGGAGCAAA CACCAATTCC AAGCTCTTAG TGAAAGGGTA CACAAACCAC AGCAGAAGGT TAACCCTAGT TCATTACCCA Y CCCTCCACCC TCTTTTGTGT GTGAACTTTT AGTGGAACAT AGCTGCACCC ACTGGCACAC AAACTAACTG TGGCTTCTGA GTCACAATGG CAGCATTGAA GGCTGCAACA GAGGCGAACG TCCTTAAAAA CTGAAAATGT AGACTCTGGT CGTTTACAGG ACATGTCTGT TAACCATTTT AGTTGCTTCA GACCTCAAAA Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | LG/J |
SM/J |
---|---|---|---|---|---|---|---|
ss321441575 | CHEV_4_154670630 | CHEVERUD | SCREENING_POP | f | SNP | T | C |
SNP Consensus Information | |||||||
SNP | Consensus Type | LG/J |
SM/J |
||||
rs222751530 | SNP | T | C |
Location: Chr4:155380978 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Prkcz | protein kinase C, zeta | Intron | ||||||
Noncoding-Transcript-Variant | ||||||||
Rr606443 | regulatory region 606443 | 163 bp distal | ||||||
Rr606444 | regulatory region 606444 | 248 bp distal | ||||||
Rr606445 | regulatory region 606445 | 472 bp proximal | ||||||
Rr606446 | regulatory region 606446 | 769 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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