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rs222751530 SNP Detail
Summary
  • ID
    rs222751530
  • Variation Type
    SNP
  • Alleles
    C/T
Genome Location and Flanking Sequence
  • Location
    Chr4:155380978 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                GGTCCAGTGT GAGGTTTTGA
    GTTCTCACAA AGACTATTCC TTGTTCCCCT GCCTTGCTCT ACCTGGGTAG TGTGGGGCTC
    ATGGGAAGAC CCAAACCTAT TTCTCTCAGG GCCTCAATTA CTGGAGCAAA CACCAATTCC
    AAGCTCTTAG TGAAAGGGTA CACAAACCAC AGCAGAAGGT TAACCCTAGT TCATTACCCA
    Y
    CCCTCCACCC TCTTTTGTGT GTGAACTTTT AGTGGAACAT AGCTGCACCC ACTGGCACAC
    AAACTAACTG TGGCTTCTGA GTCACAATGG CAGCATTGAA GGCTGCAACA GAGGCGAACG
    TCCTTAAAAA CTGAAAATGT AGACTCTGGT CGTTTACAGG ACATGTCTGT TAACCATTTT
    AGTTGCTTCA GACCTCAAAA                                            
    
    Y = C/T
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
LG/J
SM/J
ss321441575 CHEV_4_154670630 CHEVERUD SCREENING_POP f SNP T C
SNP Consensus Information
SNP Consensus Type
LG/J
SM/J
rs222751530 SNP T C
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr4:155380978 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Prkcz protein kinase C, zeta Intron
Noncoding-Transcript-Variant
Rr606443 regulatory region 606443 163 bp distal
Rr606444 regulatory region 606444 248 bp distal
Rr606445 regulatory region 606445 472 bp proximal
Rr606446 regulatory region 606446 769 bp proximal

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/18/2025
MGI 6.24
The Jackson Laboratory