rs222716038 SNP Detail

Summary

• ID
  rs222716038
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:165946659 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTAT GTACATGTAT GTATGTATTA
  W
  GTGTGTATAT GTATTTGAGT ATATG                                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320609526	CHEV_2_165930239	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222716038					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:165946659 () rs orientation: forward

Symbol	Name	Function Class
Rr570134	regulatory region 570134	1464 bp distal
Rr570135	regulatory region 570135	995 bp proximal
Rr570136	regulatory region 570136	1905 bp proximal
Sulf2	sulfatase 2	Intron