rs222598507 SNP Detail

Summary

• ID
  rs222598507
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:109237839 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTGTTTTGAG ACAGGATCTA
  ATGAAATAGC CTTGGCTGGC CTGGAACTTG CTATGTAGAC CAGGCTAGCC TTGAACTCAA
  GACTCTTGAA GACCACCTGC CTCTGCCTCC TCTGAGTGCT GGGTTTAAAG GTGTATACCA
  TCATACCAGG CTTTAAAAAT CTGATTTAAA AATTCTTTGT AGTCTAGGAA CAAATTGTTA
  C
  ATTTTAAACT GTTTTTTTGT TTGTTTGTTT GAGTCTTTGT TATGTTTAGC ACTACCCTAA
  GGAAAGGTTT GTTTTTAATG CAAAATAAAG TAGCTGTGAA GGTAGCTTCC CTGAGTGTGG
  GCAGTGCTGC CACGCTGCTC TGTGAGAAGA CACAGTGTTG ATGGGCACTC TGGGTTTTTA
  TCCCTAGACC TTTCCTGGGT                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321253910	CHEV_4_109053247	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222598507					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:109237839 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Eps15	epidermal growth factor receptor pathway substrate 15			Intron
				Noncoding-Transcript-Variant
Rr597307	regulatory region 597307			1762 bp proximal