rs222573223 SNP Detail

Summary

• ID
  rs222573223
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:121663065 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        AGCCTTGGCT CTCCTGAAAC TCATTCTGTA GACCAGGCTG
  GTTTTGAACT CAGAGAGATC CACCTGCCTC TGCTTCCCAA ATACTGGAAT TAAAGGCATG
  Y
  GCCACCACTG CTGCCTCTGC CTGCTGCCAT CCCCACCACC CAGTGCTTAA AGGTTTCTTA
  AGATGACTGC AACACTGCAA ACCATTGTTG TTACAAAAC                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320906537	CHEV_3_121572334	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222573223					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:121663065 () rs orientation: forward

Symbol	Name	Function Class
Gm65477	predicted gene, 65477	within coordinates
Rr584187	regulatory region 584187	1627 bp distal
Rr584188	regulatory region 584188	312 bp proximal
Rr584189	regulatory region 584189	1372 bp proximal