rs222544480 SNP Detail

Summary

• ID
  rs222544480
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:104455400 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTGGAGCAC ACTGACTGGC TGCTGTAGAA
  CAAAGGCATA AGTTCGCCCA TTTAGCCATT CAGGAGACCT GAGCTCTATG CTGTACCCCG
  TGGCTCTAAG CTGTACCATT TGCCACACCA GGAACAGCTG AATCAATCTT TGTTTCCATG
  R
  AGCTCAAGCA TAGAGAAGAA GGCTAAGAAA ACAAGGTTAG CAAAACACCA CGAGTGCCAA
  AACAGATGCC AAAAATGGAT AAAGTGAAAA AGTATGCAAG CCTATTAAGA ACATGCAGGG
  CACCAGGAAT TCAGTGGTCA GCTGACCCAA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321241252	CHEV_4_104270808	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222544480					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:104455400 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dab1	disabled 1			Intron
				Noncoding-Transcript-Variant
Rr596483	regulatory region 596483			308 bp distal
Rr596484	regulatory region 596484			within coordinates