rs222412958 SNP Detail

Summary

• ID
  rs222412958
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:98888459 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CACGTGTATA CTAATTTCAT
  ATATATTTGG ACAAGTTGTT ACTATGTTTC ACTTAGTGAT TTTCTTAAAA AGCAAAATGA
  ATACCAATTA ATATAGACTT CCTTATTCTA AATCTTTGTT ATATAAGAAA TATAAAAAGA
  ATAATTGTTA AACAAGGCAC AATGTATAGA AATTAAGAGA TATTTGTAAG GTAGAATCTC
  R
  AGAAATAGCT ATCTAGCTCT GGACAACAAG TCCTTGTAGT TCTCGAACAG AATTCACTCT
  ACTGACTATA AACTCTGTAG TACACTACTG CTAAGTACTT CCCTCTACTA AACAACAACA
  AAAAATTGAG GACAAAAATA AGGTTAAAAA AATCTCAGTA CTTTTCCTAA GATTAAATTC
  AGAGATATCT TTGTATTGTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321222463	CHEV_4_98666913	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222412958					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:98888459 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dock7	dedicator of cytokinesis 7			Intron
				Noncoding-Transcript-Variant
Rr595814	regulatory region 595814			417 bp proximal
Tssr42518	transcription start site region 42518			241 bp upstream