rs222381001 SNP Detail

Summary

• ID
  rs222381001
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:15328965 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AACACTGAA AGGAAAATAA AATAAAAATA
  AACAAGACCA TGGAAAGCAG AGCAAGGAAG ACAATAATTT AGGAATTCAG TTTTGAAGTA
  ATACTGTTTT ATTCAATTAA TACACAATAA TTTGGATTTG AAATAATTTC tgttagggtt
  K
  gtgtctcaaa tcttccctac aggtttttgt gctgaatgtc tgatcttcag ctctaaaagc
  taattttgga aactttgaaa cctttagaag gtACTATCTA TAAATAACTT GTGGGCTCTT
  TAAGTACAGC TCTGTTTTCT GTTCTGCTAT                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320668985	CHEV_3_15263905	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222381001					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:15328965 () rs orientation: forward

Symbol	Name	Function Class
Rr573770	regulatory region 573770	658 bp proximal
Rr573771	regulatory region 573771	743 bp proximal