rs222260421 SNP Detail

Summary

• ID
  rs222260421
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:74794186 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TTAAAAAAA AAATCCATAA CAAGTTTTAA
  ATGAGAACGC TGCCCAAATG TGTCTACTGA GCTGCGAAGC ATACATGAGG CAATGAGCTA
  AACTGTCTAA TTGTATCTGA AAGAAAAAAA TACATAAGTT ATTTAAAATA TTTagttagg
  G
  gtagttgtgc ctgcctgtaa tccaagtatt ggggagtctg aggcaagaga ttacaataaa
  gccacttgag tcTCAACTTA TGATTCTGGG TTTGAAGGCA CCATTCTGTA TGTTCCTAAA
  TTATTTGTTT TCAAGATGTT TTAGGTCTGT                                 
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320348851	CHEV_2_74801899	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222260421					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:74794186 () rs orientation: forward

Symbol	Name	Function Class
Gm75057	predicted gene, 75057	1614 bp upstream
Igs15	intergenic site 15	within coordinates
Rr559413	regulatory region 559413	426 bp proximal
Rr559414	regulatory region 559414	692 bp proximal
Rr559415	regulatory region 559415	1258 bp proximal
Rr559416	regulatory region 559416	1633 bp proximal