rs222232614 SNP Detail

Summary

• ID
  rs222232614
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132244863 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTAGGTATG ATTTCTCTGG
  TGACACTGAG GTCATCAGCG GGTAGCTAGA CTTGTCTTGT ACTGTTTTCA GCAATCATGA
  AGCACACGGA GCATTTAACT TGTCCACATT ACCTATAGGA ATCTGAGTCC AAAACCTCCA
  GGAAAGATCT ACCTCCCATT CCTCAATATA GCTGAGCCTG GCGGCCCACG CCTGGAAACC
  C
  AGCTCCTGGG GAGGCTGAGG CAGGCAGATC ATAAGTTCAA AGGCCAGTTG GAGAGTTTAG
  TGAAACCCTA TTCCCCAGTT CCAAAATGAA AAGTACAGAG ATGAGGGGAG CTGGAGAGAC
  AGCTCAGCAG TTAAGAGCAC CAGCTGCTCT TCCAGAGGAC GTAGGTTCTA GCACCCAGTG
  TCTCACAATC ACTTGCAATT                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321333990	CHEV_4_132073467	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222232614					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132244863 () rs orientation: forward

Symbol	Name	Function Class
Gm68741	predicted gene, 68741	within coordinates
n-TAagc8	nuclear encoded tRNA alanine 8 (anticodon AGC)	1473 bp downstream
Rr377207	regulatory region 377207	1237 bp downstream
Rr600998	regulatory region 600998	1524 bp distal
Rr600999	regulatory region 600999	222 bp proximal
Tssr39372	transcription start site region 39372	1724 bp downstream