rs222196165 SNP Detail

Summary

• ID
  rs222196165
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:114381869 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GACAGGAGCT TGTTTACCTT
  GGAGGGAAAA TGACATCTTC CCACATGCCA CTTCATGGTA GCATAGTATC AAAAAACACC
  AGAAGTAGCC TGGGCCAGTG TCCATGTGGA GGTGTCTTCG ACCCCTCCTG CTGCTGTCAC
  AGATTACTAT AGAGTGGGTG GCCTCAACAA CTAACATTTA TTTCTCCCAG TTCTGAAAGC
  R
  TGATAGGATC CAATGAGAAT CAGCTTTCTG GTTTGCAAAT GGCCATCTTC TCTCCTTCTC
  TCCATGACGA CCTCACATGG AAGAGAGAAA CCGAGATCCC CGATGTTCCA TTTCTAATAG
  CATCCCACTG GAGGTTAGAG TTTGGGGCAC TAGGGAAACA CAAGCATCCA GTCTGTAGCA
  GTGGAGAAAC AGGTGAATCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321274368	CHEV_4_114197277	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222196165					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:114381869 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr597591	regulatory region 597591			170 bp distal
Trabd2b	TraB domain containing 2B			Intron
				Noncoding-Transcript-Variant