rs222156758 SNP Detail

Summary

• ID
  rs222156758
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101224483 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    cttcttttt taatatttta aaatatattt
  tattCCTTTT TAGACAATTT CATACCTGTC TATATCCTTT TTAAAAGAAG ATTTTTATTT
  TTTATTTTtt gtttattagg tattttcttc atttacattt caaatgctat ccaaatgccc
  Y
  cccctcccct ccccaccccc ctacccaccc actcctactt cttggccctg gcattcccct
  atactggggc atataaaatt tgcaagacca aggggcctct cttcccaatg atggccgact
  aggccatctt ctgctacata tgcagccaga                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320851827	CHEV_3_101121090	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222156758					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101224483 () rs orientation: forward

Symbol	Name	Function Class
Gm64409	predicted gene, 64409	1233 bp upstream
Rr582007	regulatory region 582007	929 bp proximal
Rr582008	regulatory region 582008	1052 bp proximal
Rr582009	regulatory region 582009	1137 bp proximal
Rr582010	regulatory region 582010	1244 bp proximal