rs222132847 SNP Detail

Summary

• ID
  rs222132847
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:98129522 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTTCGGCA AAGAACGCTA
  TCAATGGAGC ACCCAGACAG TCCACAGGAG AGACCATCTT TACCAGCCAT ACTTCAGACA
  TTGAGCTGAC ACACAGGACT GCAGAACTTA AATACCAAGG AAATAAAAGG GCCAATCAAC
  AACTAGGCTA ATGAATTGAG TCCACAGTTA AAACAAAAAC AAAAGGCACA AATGACTAGT
  W
  ACTACTTTTA AAAAGTGTTC AATGTCCCTA GTCACCAGGA AATGTACTCT GCAGAACCAC
  CTCGATCCAG TCAAGATACT CTCATCAAGT CTGACAACAA ATGCTGAAGA GGGTGTAGTG
  AAGGGGGAAC CCTTACTCAC TGCAGGTGGA GTGCAAATTA CTACAGCCAC TATGGAAGTC
  AATATAGATA TTTCTCAAAA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321220425	CHEV_4_97907976	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222132847					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:98129522 () rs orientation: forward

Symbol	Name	Function Class
Gm70434	predicted gene, 70434	within coordinates
Rr406792	regulatory region 406792	1097 bp proximal
Rr595713	regulatory region 595713	634 bp distal
Rr595714	regulatory region 595714	1979 bp proximal