rs222043374 SNP Detail

Summary

• ID
  rs222043374
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17000324 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCGACTGAT GCTCTGGCTG
  TGGACAAAGT GAGTTGGTAC AAAGTCTCTA TAGATACCAT TTACCTGAAT ATTTGGATTA
  TTAACCTTAA GTGTGCATAG GTAAAGAATG CAGGATAGCA TGTTGTGCAT ACATTTACTT
  TAAAGTTGTG TGTTTTACTA CTGCAAATTA AATTGTAAGT CAAACTAACC AGGAAGACAC
  R
  TTGATTCTAA AACTTTGATC TGAAGATTTT ATTACTGCTT GGGTTTTTGA GGGGCAAGGT
  TATTATATTA GTCGATTGGC TAGGCTATGA TGCTCAATTT ATTAGACCAG TGACTAACCT
  AAGCCTTTCA GTGGAGAAAC AATTTGATGT GATTAAAATT AAAAGAAAGA AAATAAACTG
  TAGATGAACC TGGACCAAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321753153	CHEV_6_16950325	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222043374					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17000324 () rs orientation: forward

Symbol	Name	Function Class
Gm67154	predicted gene, 67154	within coordinates
Rr626743	regulatory region 626743	294 bp distal
Rr626744	regulatory region 626744	774 bp distal