rs222042068 SNP Detail

Summary

• ID
  rs222042068
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:135470623 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTTTATTAAT TGCCTTTTCA
  TAACTATGAC CAACATCCTG ACAGGATAAC TTAAACGGGA GAGTTTTGCC ATTGCACTCA
  TAGTTCCAGA GGACTCGGTC TGTGGAGCTG GCACTTGGGC AGAATTCATG GTGGCAGGAA
  AGTATGGCAG AGAAGGCTTT TCATACACGG AAAACAGAAA GCAGAGAGAG GAGCAGCAGG
  R
  CTGGAGAGAT GGCTCAGTGG TTAAGAGTAT GGACTGCTCT TCCAGTGGTC CTGAGTTCAG
  TTCTGAGCAC CCAAGTCAGG TGGCTCACAA CTGCTGGTAA GAACAGCTCC AATGGAGCCC
  GGCTTTCAAA GACACCTGCA TCCAGGTGTG CATGTACCAA CCTCCCTCCT TAAACCTTGG
  CCCCTTGCAT CCTGAGAAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321353028	CHEV_4_135299227	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222042068					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:135470623 () rs orientation: forward

Symbol	Name	Function Class
Il22ra1	interleukin 22 receptor, alpha 1	Intron
Rr602126	regulatory region 602126	1501 bp proximal