rs222005217 SNP Detail

Summary

• ID
  rs222005217
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:101078519 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ATATCCAAG GCCCACTTGA ACATGCAAAT
  ACTTCAACTG GAAGCACATG GCTGATCTAA AAACCTCAAG CAGGGAAATA ACCCCAGATG
  CATAAATCCC AATTCAGCAA CATAAAGAAA AGTGAAAAAG CCAAGAGACC GCTGCAGCAA
  Y
  GTCATCCACG GAGAACGAGG GAGACAGATT CCTGGGCAGA AAAGCCGGAA GAATGCTCGT
  AGCGTGTCCT AAGAAATGAA AGAAGAAAAC GAGATCGTGA TTGAGAGTTC AAACAACCGA
  ATAAAATAGG AAGACGGTGT AACATATGTA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320851226	CHEV_3_100975126	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs222005217					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:101078519 () rs orientation: forward

Symbol	Name	Function Class
Rr581973	regulatory region 581973	667 bp distal