rs221994561 SNP Detail

Summary

• ID
  rs221994561
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:117864910 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAGATGGAA AGATCTATAT
  TTAATATGGG TCACATCTTC TGCTGGCAGT TTGTATAAGG ATATGGAAGA AGGAACCTTG
  ATCTCTCTTT GCCTGCTTGC TCTTGCTAGT GAGTATACCT TCACTGGCAT TAGAGCTTAT
  TTCTTTGGAA TTCTGGACTA AAGACCAGGT GAGACATTCA GCCTCATGGA CTGAATGACC
  R
  GTGAATTCTT ACACTTTTCA TTGTTAGGAA GCCATAGTTG TACTAGCTGG ACATGCTAAC
  AAATCTTCTA ATAAACATTC TAATAAATCT TTCACATAGA TACACATACA TACAAATAGA
  TTATATATAT ATATGTAATA GATTTATATA TCTATACAAA TTTGTGTCTA TGTATATATG
  TAGTATTAGA TATAGATTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320900855	CHEV_3_117774179	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221994561					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:117864910 () rs orientation: forward

Symbol	Name	Function Class
Gm65635	predicted gene, 65635	within coordinates
Rr583881	regulatory region 583881	830 bp distal
Rr583882	regulatory region 583882	627 bp distal