rs221884236 SNP Detail

Summary

• ID
  rs221884236
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138670572 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GCCTG GAAATATGTC CCCCTCCTGG
  T
  GCCCTTCTTA GCATCAAAAT ATAAA                                      
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321378275	CHEV_4_138499176	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221884236					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138670572 () rs orientation: forward

Symbol	Name	Function Class
Rr398631	regulatory region 398631	487 bp upstream
Rr603051	regulatory region 603051	1441 bp distal
Rr603052	regulatory region 603052	873 bp distal
Rr603053	regulatory region 603053	316 bp proximal
Rr603054	regulatory region 603054	647 bp proximal