rs221764676 SNP Detail

Summary

• ID
  rs221764676
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:152664534 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    ACCTGGGCT CAGCGACGGG CCTAACCAGA
  GAGCTGGAGT TACAATCCCT GTTTTCTTCG ATTAAAACTG TGTAAGGCAg ggactggaga
  gatggcttaa tgtttaagag cactggctgc tcttccagag gatcctggtt caattcctag
  Y
  gtctgcacgg caactcacaa ctgtctgcaa cttcagttcc agggcttctg gcaccctcac
  acagaaatac atgcgggcaa aacaccaatg cacattaaaa taaataaaCA AAACAAAAAC
  AAGAAACAGT GTAAGACCAA GGGAGCCAGA                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320068139	CHEV_1_154635913	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221764676					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:152664534 () rs orientation: forward

Symbol	Name	Function Class
Rr420540	regulatory region 420540	1511 bp distal
Rr420541	regulatory region 420541	1450 bp proximal
Rr420542	regulatory region 420542	1553 bp proximal
Rr420543	regulatory region 420543	1677 bp proximal