rs221683515 SNP Detail

Summary

• ID
  rs221683515
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152062847 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCTCCTGAA CTGCTGTGTC
  TGGAGTCTGC AGTCTGTGCC CTGAGTCCCA GCACGGCTCT GTAGCGTGGC ACACACCGCC
  CTGCTCTCCT CCTTTTTGTG AGAGCAAAGG AGCAGAAGGC CATGCTTAGG AGCAGGGTGC
  CATGGGGTTC TCGTGACACA GGTGAGGGAC CATTTGAGCC CACATATGTT CCTAGGCAGA
  Y
  GTGCCCGTTT GTGGGGCAGC ACACAGCCCT ACACAGCTGA ACGGCTTCAC AAACAATACT
  GGTCCTCTTC AAGAAAAGTA GGAGGTCCAG CTGCTCACGT CAAGTGTCTG TTTTGAGGCA
  GGATCTCACA GTGTGTTCTA GATGACACCA TACTTACTAT GTAGCCCAGG TTAGCCTTTA
  AGTTCATCAC TATGTATCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321433795	CHEV_4_151352499	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221683515					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152062847 () rs orientation: forward

Symbol	Name	Function Class
Dnajc11	DnaJ heat shock protein family (Hsp40) member C11	Intron
Rr605686	regulatory region 605686	455 bp distal
Rr605687	regulatory region 605687	269 bp proximal
Rr605688	regulatory region 605688	456 bp proximal
Rr605689	regulatory region 605689	1983 bp proximal