rs221666221 SNP Detail

Summary

• ID
  rs221666221
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:105615306 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCAACAAATG TATAGACACA AATGTATAGG CACACAGGAG
  AAGCAGACGT AGGATGCTAG CAGACACTTC TTGTGAGCTT AGATCAATCC TGAATAAGCC
  G
  AATGCATAGA GTTTGAATGA TCAGAGCTCT TGAAGTTCGG CTATGCTGGG GTGACTTCCC
  GGAGGAGGGA AATGTCGTAG GAGGTCATTA TGAAATGTC                       
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320863085	CHEV_3_105510908	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221666221					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:105615306 () rs orientation: forward

Symbol	Name	Function Class
Inka2	inka box actin regulator 2	Intron
Rr367522	regulatory region 367522	777 bp downstream
Rr582759	regulatory region 582759	996 bp distal
Rr582760	regulatory region 582760	23 bp distal