rs221660476 SNP Detail

Summary

• ID
  rs221660476
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:141409777 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCATCGTGT CACTGAAGTG
  AGTCTCGGCA CACAAACAAG TGGTAAAAAA GAACAAGACC AAAGAACAGA AACCCCTGTA
  AGTGCCCCTA AAGTTTCAAA AACTCCTGAG ATATGAACCC GTCTGTGCTC GATGACTTCA
  ATTTTGATGA ATAAAACCAA GCCTTGAAAG GGGGGGGGGG GAGAATGATA GTGACTTTTA
  A
  GCAAAGTCAG TTAATGCTAA GTTCAGAATT CGATTTTAAT ACTTTCATTT TAATAAACTC
  TCAACCTGGA ACCTGGAATT ATCCTTAAAA TCCTTTTCAA GAAAAGTAAG ATTACAGATT
  CCTGCCAGAC ACCTAAGACA ACAGTTTATA TTCCAGGAAA GGATTCTTTC AAACCTATCC
  AGAGTGATTA TTGCACAGTG                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321388972	CHEV_4_141238381	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221660476					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:141409777 () rs orientation: forward

Symbol	Name	Function Class
Ddi2	DNA-damage inducible protein 2	mRNA-UTR
Rr603858	regulatory region 603858	362 bp distal
Rsc1a1	regulatory solute carrier protein, family 1, member 1	1097 bp downstream