rs221613695 SNP Detail

Summary

• ID
  rs221613695
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:4406556 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTCTCTTA CCTGTTAATG
  GATAGTGCTT ATCGGAGAGT ATAGTTCTTG TGTCACGAAT CTCACTAAGT GTTGTGTCTC
  AACTAGATCA CTCATCATCA TCATCATCAT GATACAAACA AATGCAAGAC CGCACACTCA
  TGTCCCCTCC TGCCTCTGGT TGAAGTTCCC GCCTCTTTTA TACTACAGTG CTACTTAAGA
  Y
  TGCTTGAGTG TGCTGTCTTT ACTTTCTCTC TTGAGCGTCC TTCGGTCAGG CATCTGATGA
  GATGAGTCAA TCATTGATGA TGGCTCTGGT GCCTGCCTTA GCACAGAGCC ACAGGTGGCC
  TCTGAGACTT CATCTTCCTT GGCTTATCAT CCCAATAGCA AGATTGGGTA CAGCGTTCAT
  TGATGAAAAG CCTTCTGTAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321727394	CHEV_6_4356556	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221613695					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:4406556 () rs orientation: forward

Symbol	Name	Function Class
Rr626010	regulatory region 626010	1276 bp proximal
Rr626011	regulatory region 626011	1358 bp proximal