rs221507804 SNP Detail

Summary

• ID
  rs221507804
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:180428746 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCTGG CCTCCAGGGG GCAGTATGCC
  Y
  CTGATCTTGT GTTGTTCTGT CCAAT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320632337	CHEV_2_180521658	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221507804					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:180428746 () rs orientation: forward

Symbol	Name	Function Class
Gm75401	predicted gene, 75401	1220 bp downstream
Rr572845	regulatory region 572845	350 bp distal
Rr572846	regulatory region 572846	within coordinates
Rr572847	regulatory region 572847	3 bp distal
Rr572848	regulatory region 572848	1027 bp proximal