rs221198870 SNP Detail

Summary

• ID
  rs221198870
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:98887100 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTTTGGATG GGAGATAGCA
  GGAAAGCTAA GTTTAAAAGA CAGCAAGAGT AAAAGAACTG AAGATACAAG GTTTACAAAG
  TAAACGAACC AAGACACAAA GTATAATGGG CTCTACTTTA AGAGACAGCA GAGCTGGCAT
  GATGGCACAT TCCTTTAATC CCAGCACTGG TTCTAGGATA CACTCCCTCC CCCACCCCCA
  Y
  CCCCCAATAT CAGAAAATAG TGTACAAAGT AGCAGCATGA ACACCAGGGA GAATTTCTAA
  AGTGAGAACT AACATGTCTG TCTGTCTGTC TATCTGTCTG TCTGTCTGTC TGTGAATGAA
  AATGATTCAG TATATAGGAG GGAACTGATC ATTCAGGACA AGAGATCAAA GAACTCCTAG
  AGTGGGAATC CTGAGTAGGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321222460	CHEV_4_98665554	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221198870					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:98887100 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dock7	dedicator of cytokinesis 7			Intron
				Noncoding-Transcript-Variant
Rr595814	regulatory region 595814			1776 bp proximal
Tssr42518	transcription start site region 42518			1112 bp downstream