rs221104284 SNP Detail

Summary

• ID
  rs221104284
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:33102911 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACACAAGCAC GTTAATAACT
  TTCTCTGTCT TGAAACAATG TGGCTGGCTC AGAAGTGTCC CACACTGCCA CTGCTATCTC
  TTGTCCTCTG CCTTCTCATC CCTCTCCACG TCTTTCTTTA TTTCTCATAT TTTTCTGTTC
  TTATCCTCTT CCCCTTCCTC CCATCATCTT CCCCTCCTCC CCCTGCATCC CTTTTCCTCT
  M
  TTTCTTCTTT ACTCCTCCTC CGGTCCTCTC CTCTTCCTCT CTCCATCGCT TACTTCTGTT
  TCTATCCCTC TCCTCTTTTC CTGTCCACCA CGTCTTCTTC TCTTCATGCT CCTTTCCTCA
  TTCAATTTTC ATTTTCAAGG AAAAATTCCT GGTCATGGAC TGACCAGCAA AGATGTGGGA
  AGATGCCATA GATCCTGAAC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321780601	CHEV_6_33075976	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221104284					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:33102911 () rs orientation: forward

Symbol	Name	Function Class
Rr628172	regulatory region 628172	536 bp proximal
Rr628173	regulatory region 628173	1414 bp proximal