rs221101365 SNP Detail

Summary

• ID
  rs221101365
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:116688918 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACGCATCAGA CTGAGTCAGG TGATTGCCAG ACATTCAAGT
  CCAGACTACA CAGAAAGTTC CAGAACATTC TGGACTACCA AGTGAGATCC TGTCTTAAAA
  K
  TCCCACTGCT GCTGCAGCCA CCTCCACCCC AGCTTGAAAG AGATGGGACT GGCCTTTTAA
  AGCCCCCCAC CCCCCATCCT AATCTCCCAG GCCACTTGT                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321918786	CHEV_6_116661975	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs221101365					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:116688918 () rs orientation: forward

Symbol	Name	Function Class
Rr637245	regulatory region 637245	328 bp proximal
Rr637246	regulatory region 637246	605 bp proximal
Tmem72	transmembrane protein 72	Intron