rs220655149 SNP Detail

Summary

• ID
  rs220655149
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:17027269 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCACCCGAG AGAAAAAAAT
  GGCAGTGAGA AATCAATGCT GCCAGTGCTT TAAATAATTA TAATTTTAAA ATAGAAAAAA
  TCTTGAGTAA CTTATTATCT TTGAGGCAAA CACACCTCCA CACATACATG AACAAGCACA
  CCCAGACATT CTCTGTCACA GTTTGTTATA ATTGTCCAAC TGTTTTCTCC CTTCTTTCAC
  R
  CATAGGTTTA TTAGGATTCC CAAAAGTGCT TTAAACAAAA TAAATCAATA TCTTTGATTC
  ATCTACCAGA TCACTAAGCC TTTATTAAAC TCAGTCTTAG TGAAGTTGTA AGAGAACAAA
  TTCTATTTAA ACAGAAAAAG TGAGGTGGTG TCTTTCTCAT CAGTAACCAC AGAAATATAG
  AGCCCGAGTG AAGAAGATTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321753299	CHEV_6_16977270	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220655149					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:17027269 () rs orientation: forward

Symbol	Name	Function Class
Rr626745	regulatory region 626745	355 bp proximal
Rr626746	regulatory region 626746	470 bp proximal