rs220631657 SNP Detail

Summary

• ID
  rs220631657
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:132252321 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TAAAAGGCT GACTTGTACC GCagcacatc
  gcctaaacaa gcccgctgaa agctttgggt tcaggcccaa gcttggcata aaactgaatg
  tgctggaggc acacacccat gcactctcaA GGTTGggctc agtggggaag ggcacttgct
  R
  tgtaagcagg aggacctcac tttagatcct aacacccaca taaaaattgg gcgtggcttt
  gcgcatgtta acgctgagca tggctgggag gagggaggag ataggaggat tgctaaggtt
  gctggctaTT ATATTTTtga gaaccttttc                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321334093	CHEV_4_132080925	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220631657					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:132252321 () rs orientation: forward

Symbol	Name	Function Class
Gm68741	predicted gene, 68741	within coordinates
Rr377208	regulatory region 377208	within coordinates
Rr601000	regulatory region 601000	within coordinates
Rr601001	regulatory region 601001	1770 bp proximal
Rr601002	regulatory region 601002	1862 bp proximal