rs220522873 SNP Detail

Summary

• ID
  rs220522873
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148253174 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTAC TCAGTGGGCG CCCATTAAGA
  G
  CTGTGCTGGA GGCAGAGGCA GGTGG                                      
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321417774	CHEV_4_147542826	CHEVERUD	SCREENING_POP	f	SNP	G	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220522873					SNP	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148253174 () rs orientation: forward

Symbol	Name	Function Class
Cpgi15297	CpG island 15297	1729 bp distal
Cpgi15298	CpG island 15298	959 bp proximal
Gm68449	predicted gene, 68449	within coordinates
Rr604611	regulatory region 604611	1449 bp distal
Rr604612	regulatory region 604612	within coordinates
Rr604613	regulatory region 604613	444 bp distal
Rr604614	regulatory region 604614	219 bp distal
Rr604615	regulatory region 604615	1998 bp proximal