rs220437899 SNP Detail

Summary

• ID
  rs220437899
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:110574252 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTACATATAT AAGAAAATAT
  TTCTTAGCAT ATAAATAATT ATTTCAGAAA TTTGCATAGT TAAGTGGTAA TAGTATTAGC
  ATAATCCCTT TCATTTATAC ACATAAAGGG TATTTATAAA GCAGACAAAA GGGACTGGAA
  AAACAGAGAG GGCAGGTCAC TTTCTTAAGC ACCCATAGTA TGTCTCATTT AGGCAATGGG
  K
  ATGTGTGAGT ATGCTCATTC ATTTTCCTAT AGTTACATTA TTATTACTGT TGTGACAGAT
  GTTATTTTCA TTATTATGCT GTACCTGTTT GATTATAGTT TATGTATTTT TAATATCAAT
  AATTAGCATA GAGATGACAG AATAGTAGTG GAAAAACATA AGTGGACTAT TGACTCGGGA
  CAAAGATTCC CCCAGACCCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320873367	CHEV_3_110469854	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220437899					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:110574252 () rs orientation: forward

Symbol	Name	Function Class
Rr583482	regulatory region 583482	547 bp proximal