rs220431083 SNP Detail

Summary

• ID
  rs220431083
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:114379697 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCTGGTGTTA AAGAGGTGCC
  AGTGGAAGCA GGCAGGGAGG GGTCTTCGAA CATGAAAGTT AACTGGCCTT AAAGTTCATT
  CCCTTCACTT AGCAGCCAGA CTATGACTGG CTCTGAGTAC CCACCAGGCC CATAGCACTG
  GCAATGGGAG GGTCAGATGG AAAGTACAGG GCACAGTAAA GAACATGGGA AAAAGAGAAA
  K
  GAAAATGGGA GACAAGTTGT GGCCAGGCCC ACCGAGCTGG GTCTCTGGAA TAAAAGCCCC
  TGTTGGTCTC AGGTAGGGCC TCTTTGTATC TGAGGAAAGG AATGAGTCCC CAGCAAAACC
  TCTTTTGCTC CTTGACCACC AATTAGAGCT CTGGATTTCT GGCTGCATGG TTTACCTCCC
  AGTGTATTAG GCCCTGTGTG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321274365	CHEV_4_114195105	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220431083					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:114379697 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Rr597591	regulatory region 597591			1204 bp proximal
Trabd2b	TraB domain containing 2B			Intron
				Noncoding-Transcript-Variant