rs220178743 SNP Detail

Summary

• ID
  rs220178743
• Variation Type
  SNP
• Alleles
  T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:152448624 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGGGATCTC GGCTGGGTCC CGGTTAGGGA
  CTGAGGTCAG CAGGATGATT CTGGGAGCCA AGCAGGTCCA AGAAAGGATT AGTGTTAGTG
  AGCTGTCACA GTCCCAAGAG ACACACACAC AAGAATATAC TCAGCATGGG GTgggcatgg
  T
  ggtgcatacc tctgatccca gtacttgggc tgcagagaca gactgatctc tgtgagttca
  agagcagcct gatctacaca gcaagctcca ggacaaccct gggccacaca gagagctctt
  gtctcaaaGC TCTCTCTCTT TCCTCTCTCT                                 
  
  T = T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321434336	CHEV_4_151738276	CHEVERUD	SCREENING_POP	f	SNP	T	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220178743					SNP	T	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:152448624 () rs orientation: forward

Symbol	Name	Function Class
Chd5	chromodomain helicase DNA binding protein 5	Intron
Rr605861	regulatory region 605861	1113 bp proximal