rs220061853 SNP Detail

Summary

• ID
  rs220061853
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:102872008 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTGATTAAG AGGAAGGGCT CCATCTCCAA
  AGACCTCCTT CTCTGGTCAT TTCTAACTTG CTACCTTAGG AATGCCTAAT GGTCATCGAA
  TTTGATTCAC ACTAAGTAAG TAGTAGTTCA CTGTGTATCG GGAAACATCC ATTCAGCTGT
  K
  CAGCTTTAGA CACATTTCTT TAACTCTCTC CTGACTGCTT TCTCCTGTTA AAGATGATGA
  TAAAGTACTG TCCCTCCCTT AGAGGTTAAC TGCAGCTCAA GGGTGAAGGT GATGTTTAAA
  GACCAAACGC AATGAGCACC CAACCTGTTG                                 
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321235533	CHEV_4_102687416	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220061853					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:102872008 () rs orientation: forward

Symbol	Name	Function Class
Rr596350	regulatory region 596350	1954 bp proximal