rs220046974 SNP Detail

Summary

• ID
  rs220046974
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:29865430 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACATACAGGT GTACACAGAT ATAAACACAT GCATGCACAC
  ACACGTACAC ACACACACAC ACACACACAC ACACACACAC AGACACACAC ACACACACAC
  R
  CATGTGTCTA TAGTGGAGAC AATTTGATTA AGTAGGAAAA CTCCATGTGA CAGCATGCGT
  ACCTTAGTCT CTCTGGAATT CTAAACCATA AAAGTAGGC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320693147	CHEV_3_29710203	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs220046974					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:29865430 () rs orientation: forward

Symbol	Name	Function Class
Gm33206	predicted gene, 33206	within coordinates
Gm65557	predicted gene, 65557	1354 bp upstream
Rr574687	regulatory region 574687	1264 bp proximal
Rr574688	regulatory region 574688	1365 bp proximal
Rr574689	regulatory region 574689	1800 bp proximal