rs219923522 SNP Detail

Summary

• ID
  rs219923522
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:82463369 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGAGGTCAG GCGTCTTCCT
  CAATCTCTCT TCACCTTATT TTTGAGACAG TGGCTCATAC TAAATAGAGA GCTCATGCAT
  GGTCTACAGT GGCTGCCCAG GGGATTCTGG GGATCCTCCC GTCTCTCCCC TTACTCCCAG
  CACCAAGATT AAAGACACAT CAGCACAGGA GACCTTTATG TAGGTACTGG GAATCCAGAT
  Y
  AGGTCCCCAG GCATTCATGG CAGTACTTTG TCAACTGAAC TCTTCCCTCA GACCCTCAGT
  GAGACTTTGG GGGTGAGTGG AACACTTTGG CTTAAAAGCG GTATGTTTGT GTGTCAAGCT
  GATAAAGGGT TAAGTGTTAT GTTTAGCTCT AACTGTCAAT TTGACATAAA CTCTAATCGC
  ACGGGAATAC AGTTCCAATA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321185798	CHEV_4_82191036	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219923522					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:82463369 () rs orientation: forward

Symbol	Name	Function Class
Gm11266	predicted gene 11266	within coordinates
Rr594371	regulatory region 594371	1782 bp distal