rs219906998 SNP Detail

Summary

• ID
  rs219906998
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:58279194 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCAGGAGG AGGAAGACAA
  TAGGAATAAA CAAGGAGGGG TTTGCTGTTA GGTAGGGACT CACAAGGCAG TTCCCAGTCT
  CCCCTCTCGG TCTTTCCAAA TGAGGAATTT CTCGGTAAGA TCTAGGATTC AGGGAGGCAA
  AAGAAATAAG GATGCAGAGT GGAGGCTTAT CGTGTACTTG GGGACCAGAT AGCAGTTGTA
  K
  TATAAAAAGG GTTAGGCAAG GTAATTGCCT TGGCATTGCT CTTCTGACTC CAAATGACAA
  AGGCTAGGCA AAGTCCAAAC CTTTCTTTCC CTATATATGG AATATGTCCA GAATTCCCGC
  CTGTTATTTT TTCCCTGATA GACTGTAGTA ACTAACATTC TCCTTTTTGA GCTTCCACTG
  TCTGTGGGCC ATATTTATAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321137471	CHEV_4_58292066	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219906998					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:58279194 () rs orientation: forward

Symbol	Name	Function Class
Rr592884	regulatory region 592884	455 bp distal