rs219874070 SNP Detail

Summary

• ID
  rs219874070
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:146800022 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAGAGCCATC CCTCTGTGAT
  ACATGGTGGA GGTGATACTT GTGAGATACG GTTGGGTTGT TTCTTCATCA TGCCTGGCAT
  CCTGTGTGCA CCTGCCTGGC ATCCCATGTC CTCCTGTTTG ACTAAAAGGA TGACTCATCT
  ATCTATCTAT CTATCTATCT ATCTATCTAT CTATCTATCT ATCTATCTAT CTGTCTGTCT
  R
  TCTGTTTTTG AGAAGAACTT CTCCAACTGC ATATCTTTAG GGCTTTTTCC TAAATCTCAT
  ACAAAGAGAC CTGGGTGCAG TAGCTCACCC GTGCAGGCCT AGTACTTAGG AGGCTGAGGA
  GGAAGATACA AGGCCAATCT GGTATGTATA TTGAAACACT GACTCTAAGT AAATAAATAA
  ACCATCAAAC AAATAAGTTA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321011274	CHEV_3_146757231	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219874070					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:146800022 () rs orientation: forward

Symbol	Name	Function Class
Gm29771	predicted gene, 29771	within coordinates
Gm65947	predicted gene, 65947	1502 bp downstream
Rr375880	regulatory region 375880	371 bp downstream
Rr587122	regulatory region 587122	1720 bp distal
Rr587123	regulatory region 587123	809 bp distal
Rr587124	regulatory region 587124	1492 bp distal