rs219861718 SNP Detail

Summary

• ID
  rs219861718
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:7657434 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATAAAGAAA CCCTGTCTCA
  AAAAAAAAAA AAGCAAAACA AACAAATAAA CAAGACTACC ATGTTAATGA TTTCTTTTCA
  ACTCCCGCTG CAATGCTTTC TGAGCAAGTG CTAGTGCAAC CAACTTGCTA AATCAAGTGG
  ACAACTGCTC ACATGGAGGT CACATGTGTA ACTCAAGCTA CTTCGGTTTT TAAAGCACAG
  K
  GGTGTTTTCT CTCACCCATT AGGCTTATAT ACACACCACG GAAAATGTAC GACCACATAC
  AAGCTGGAAA GTGGCTTTCA AATGTCTCAA GGAAAGAGAC TTGTCTTTCT TGAATCTAAG
  CAGGGTAATA CAGCCTGTGA TCCCAACTCT CAGGGGGCTG GGGCAGGAGG ATCACAAGGT
  TAGGGCCAAT GTAGGCTTCA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321734387	CHEV_6_7607434	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219861718					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:7657434 () rs orientation: forward

Symbol	Name	Function Class
Gm35051	predicted gene, 35051	within coordinates
Rr626301	regulatory region 626301	619 bp distal