rs219847446 SNP Detail

Summary

• ID
  rs219847446
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:8930556 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTGCTTTCT CAACAAGGCC
  AACAACACAA CTTTTAACTA ACGTTAGGAA GAGACTGCAT CCCCAAAGGC AAGTGACACA
  AACTGCAAAC CTTAGACAAC CTTGAAGTGG CCCTAGACCT TGAAGTCTGG TTCTCTTATG
  CCCTCCAGGA CTCTCACCTC TGAGAACTTC ACCATGCCCT AGTGAAAGCA TGAAATAGAA
  S
  AAAGACAATA CGCCATCCAC TCTCAAAGAG CAGCCCACCA CCTCACGGCC CACCACCTCC
  TAGGGGTTTA ATAAATACTA AGACTGATGA GCTGTGCAGA TGAGCGAAAC CTGACTGCAG
  TGAATTTAAG TAATAAGAGT AGATTTTCAC ACTAAAGTAA AACATAGTTG AATATTTTCT
  TTTCTTTTCC ATCGTGAAAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320648902	CHEV_3_8865496	CHEVERUD	SCREENING_POP	f	SNP	C	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219847446					SNP	C	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:8930556 () rs orientation: forward

Symbol	Name	Function Class
Mrps28	mitochondrial ribosomal protein S28	Intron
Rr406711	regulatory region 406711	within coordinates
Rr407269	regulatory region 407269	601 bp proximal
Rr573330	regulatory region 573330	1690 bp distal
Rr573331	regulatory region 573331	566 bp distal
Rr573332	regulatory region 573332	within coordinates