rs219760290 SNP Detail

Summary

• ID
  rs219760290
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:138667326 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGCC CCTTCATTTC TCTCTCTCTG
  A
  GTATCATTTG CCTCCTGGGT ACCAT                                      
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321378243	CHEV_4_138495930	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs219760290					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:138667326 () rs orientation: forward

Symbol	Name	Function Class
Gm33011	predicted gene, 33011	1407 bp upstream
Rr603049	regulatory region 603049	1966 bp distal
Rr603050	regulatory region 603050	892 bp distal
Rr603051	regulatory region 603051	1461 bp proximal
Rr603052	regulatory region 603052	1947 bp proximal
Tssr44194	transcription start site region 44194	1384 bp upstream